Transcript: ENST00000374145.1 PIGV-002

Description

phosphatidylinositol glycan anchor biosynthesis, class V [Source:HGNC Symbol;Acc:26031]

Gene Synonyms

FLJ20477, GPI-MT-II, HPMRS1, PIG-V

Location

Chromosome 1: 27,114,686-27,124,884 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 4450 variant alleles and maps to 482 oligo probes.

Gene

This transcript is a product of gene ENSG00000060642.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374145.1	PIGV-002	2713	493aa	ENSP00000363260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS287	Q9NUD9	NM_001202554.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000078527.4	PIGV-001	2367	493aa	ENSP00000078527.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS287	Q9NUD9	NM_017837.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449950.2	PIGV-201	1464	265aa	ENSP00000395156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DWP9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431541.1	PIGV-005	716	120aa	ENSP00000388425.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455364.1	PIGV-006	707	182aa	ENSP00000406080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430292.1	PIGV-003	608	72aa	ENSP00000399067.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000472757.1	PIGV-004	932	74aa	ENSP00000436884.1	Nonsense mediated decay		E9PQC7	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,713 bps, Translation length: 493 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NUD9

CCDS

This transcript is a member of the Human CCDS set: CCDS287

Version

ENST00000374145.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000011441 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000374145.1 PIGV-002

Summary