Transcript: ENST00000375541.5 CROCC-001

Description

ciliary rootlet coiled-coil, rootletin [Source:HGNC Symbol;Acc:21299]

Gene Synonyms

KIAA0445, ROLT, rootletin

Location

Chromosome 1: 17,248,445-17,299,474 forward strand.

About this transcript

This transcript has 37 exons, is annotated with 49 domains and features, is associated with 30578 variant alleles and maps to 1292 oligo probes.

Gene

This transcript is a product of gene ENSG00000058453.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375541.5	CROCC-001	6656	2017aa	ENSP00000364691.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30616	Q5TZA2	NM_014675.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445545.2	CROCC-002	3931	1311aa	ENSP00000402626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000467938.1	CROCC-004	2515	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466256.2	CROCC-003	1868	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492631.1	CROCC-005	1373	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465021.1	CROCC-014	780	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486318.1	CROCC-011	724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465291.1	CROCC-015	683	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477773.1	CROCC-013	648	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467715.1	CROCC-009	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000498688.1	CROCC-012	583	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494191.2	CROCC-006	1996	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497654.2	CROCC-016	508	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 6,656 bps, Translation length: 2,017 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TZA2

CCDS

This transcript is a member of the Human CCDS set: CCDS30616

Version

ENST00000375541.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000006249 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375541.5 CROCC-001

Summary