Transcript: ENST00000382643.3 RAD51-009

Description

RAD51 recombinase [Source:HGNC Symbol;Acc:9817]

Gene Synonyms

BRCC5, HRAD51, HsRad51, HsT16930, MRMV2, RAD51A, RECA

Location

Chromosome 15: 40,987,372-41,023,791 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 16 domains and features, is associated with 18022 variant alleles and maps to 479 oligo probes.

Gene

This transcript is a product of gene ENSG00000051180.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267868.3	RAD51-001	2266	339aa	ENSP00000267868.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10062	E9PNT5 Q06609 Q9NZG9	NM_002875.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423169.2	RAD51-002	1611	280aa	ENSP00000406602.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53932	E9PNT5 Q06609 Q9NZG9	NM_001164270.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000382643.3	RAD51-009	1588	340aa	ENSP00000372088.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53931	Q06609 Q9NZG9	NM_001164269.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532743.1	RAD51-008	1515	340aa	ENSP00000433924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53931	Q06609 Q9NZG9	NM_133487.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557850.1	RAD51-003	1397	242aa	ENSP00000454176.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q06609 Q9NZG9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000526763.1	RAD51-006	625	75aa	ENSP00000431897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NZG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527860.1	RAD51-007	566	172aa	ENSP00000432759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PNT5 Q9NZG9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000525066.1	RAD51-004	1545	151aa	ENSP00000431864.1	Nonsense mediated decay		E9PJ30 Q9NZG9	-	-
ENST00000531277.2	RAD51-010	658	100aa	ENSP00000436512.2	Nonsense mediated decay		E9PI54 Q9NZG9	-	-
ENST00000533741.1	RAD51-013	425	65aa	ENSP00000433053.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530766.1	RAD51-011	434	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,588 bps, Translation length: 340 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06609

CCDS

This transcript is a member of the Human CCDS set: CCDS53931

Version

ENST00000382643.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000387937 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000382643.3 RAD51-009

Summary