Transcript: ENST00000261588.4 KIAA0556-001

Description

KIAA0556 [Source:HGNC Symbol;Acc:29068]

Location

Chromosome 16: 27,561,473-27,791,690 forward strand.

About this transcript

This transcript has 28 exons, is annotated with 13 domains and features, is associated with 96083 variant alleles and maps to 749 oligo probes.

Gene

This transcript is a product of gene ENSG00000047578.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261588.4	KIAA0556-001	6616	1618aa	ENSP00000261588.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32415	B4DHT8 O60303	NM_015202.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000568258.1	KIAA0556-009	746	249aa	ENSP00000454884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000565672.1	KIAA0556-005	767	55aa	ENSP00000455380.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000567894.1	KIAA0556-004	2262	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000573850.1	KIAA0556-010	3237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000568622.1	KIAA0556-008	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000564749.1	KIAA0556-003	564	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566023.1	KIAA0556-002	440	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562207.1	KIAA0556-006	321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 28, Coding exons: 28, Transcript length: 6,616 bps, Translation length: 1,618 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60303

CCDS

This transcript is a member of the Human CCDS set: CCDS32415

Version

ENST00000261588.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000433724 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000261588.4 KIAA0556-001

Summary