Transcript: ENST00000431623.2 POLR2B-014

Description

polymerase (RNA) II (DNA directed) polypeptide B, 140kDa [Source:HGNC Symbol;Acc:9188]

Gene Synonyms

POL2RB, RPB2, hRPB140, hsRPB2

Location

Chromosome 4: 57,845,030-57,897,324 forward strand.

About this transcript

This transcript has 24 exons, is annotated with 20 domains and features, is associated with 22007 variant alleles and maps to 647 oligo probes.

Gene

This transcript is a product of gene ENSG00000047315.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381227.1	POLR2B-001	4108	1174aa	ENSP00000370625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3511	B2WTN6 C9J2Y9 C9JMN3 P30876	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441246.2	POLR2B-006	3839	1167aa	ENSP00000391452.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2WTN6 C9J2Y9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000314595.5	POLR2B-201	3748	1174aa	ENSP00000312735.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3511	B2WTN6 C9J2Y9 C9JMN3 P30876	NM_000938.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000431623.2	POLR2B-014	3666	1099aa	ENSP00000391096.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2WTN6 C9J4M6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450656.1	POLR2B-003	608	64aa	ENSP00000408638.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMN3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433463.1	POLR2B-005	539	76aa	ENSP00000407728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JZW8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510355.1	POLR2B-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478188.1	POLR2B-002	3093	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497845.1	POLR2B-007	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495311.1	POLR2B-004	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484821.1	POLR2B-011	446	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464918.1	POLR2B-010	444	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 3,666 bps, Translation length: 1,099 residues

Version

ENST00000431623.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362246 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000431623.2 POLR2B-014

Summary