Transcript: ENST00000340096.6 OFD1-001

Description

oral-facial-digital syndrome 1 [Source:HGNC Symbol;Acc:2567]

Gene Synonyms

71-7A, CXorf5, JBTS10, RP23, SGBS2

Location

Chromosome X: 13,752,864-13,787,472 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 18 domains and features, is associated with 11764 variant alleles and maps to 721 oligo probes.

Gene

This transcript is a product of gene ENSG00000046651.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380567.1	OFD1-002	3736	872aa	ENSP00000369941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NF31	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340096.6	OFD1-001	3611	1012aa	ENSP00000344314.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14157	A6NF31 A8K2T9 E9KL37 O75665	NM_003611.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380550.3	OFD1-201	3531	972aa	ENSP00000369923.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLQ3 O75665	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000398395.3	OFD1-202	1597	367aa	ENSP00000381432.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O75665	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490265.1	OFD1-003	4259	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464463.1	OFD1-004	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485052.1	OFD1-006	685	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466534.1	OFD1-007	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474705.1	OFD1-005	496	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 3,611 bps, Translation length: 1,012 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75665

CCDS

This transcript is a member of the Human CCDS set: CCDS14157

Version

ENST00000340096.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055808 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340096.6 OFD1-001

Summary