Human (GRCh37.p13)
Description

tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:18884]

Gene Synonyms

FLJ11090, SCAN1

Location
About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 33272 variant alleles and maps to 382 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000335725.4TDP1-0013696608aaENSP00000337353.4
 
Protein coding
CCDS9888B3KN41 G3V2J6 G3V2U6
G3V3Q0 G3V554 G3V5B8
G3V5F9 Q9NUW8
NM_018319.3GENCODE basic
ENST00000393452.3TDP1-0032370589aaENSP00000377098.3
 
Protein coding
E7EPD8 G3V2J6 G3V2U6
G3V3Q0 G3V554 G3V5B8
G3V5F9
-GENCODE basic
ENST00000357382.3TDP1-2012210369aaENSP00000349952.3
 
Protein coding
B3KN41 Q86TV8 -GENCODE basic
ENST00000393454.2TDP1-0062068608aaENSP00000377099.2
 
Protein coding
CCDS9888B3KN41 G3V2J6 G3V2U6
G3V3Q0 G3V554 G3V5B8
G3V5F9 Q9NUW8
NM_001008744.1GENCODE basic
ENST00000555880.1TDP1-0071894578aaENSP00000450628.1
 
Protein coding
G3V2F4 G3V2J6 G3V2U6
G3V3Q0 G3V554 G3V5B8
G3V5F9
-GENCODE basic
ENST00000556063.1TDP1-0081076281aaENSP00000450795.1
 
Protein coding
--CDS 5' incomplete
ENST00000554180.1TDP1-009910279aaENSP00000450872.1
 
Protein coding
G3V2U6 G3V3Q0 G3V554
G3V5B8 G3V5F9
-CDS 3' incomplete
ENST00000553527.1TDP1-013910146aaENSP00000451358.1
 
Protein coding
G3V3Q0 -CDS 3' incomplete
ENST00000553617.1TDP1-010876219aaENSP00000450708.1
 
Protein coding
G3V2J6 -CDS 3' incomplete
ENST00000556867.1TDP1-011748151aaENSP00000452279.1
 
Protein coding
G3V3Q0 G3V5B8 G3V5F9
-CDS 3' incomplete
ENST00000553989.1TDP1-014728147aaENSP00000452333.1
 
Protein coding
G3V3Q0 G3V5F9 -CDS 3' incomplete
ENST00000556498.1TDP1-017597161aaENSP00000452183.1
 
Protein coding
G3V3Q0 G3V554 G3V5B8
G3V5F9
-CDS 3' incomplete
ENST00000554976.1TDP1-0023040191aaENSP00000452042.1
 
Nonsense mediated decay
G3V3Q0 G3V4W8 G3V554
G3V5B8 G3V5F9
--
ENST00000545686.2TDP1-0042488298aaENSP00000444587.2
 
Nonsense mediated decay
G3V2U6 G3V3Q0 G3V554
G3V5B8 G3V5F9 Q9BRS7
--
ENST00000555178.1TDP1-0052200259aaENSP00000452363.1
 
Nonsense mediated decay
G3V3Q0 G3V554 G3V5B8
G3V5F9 G3V5H9
--
ENST00000557782.1TDP1-01631851aaENSP00000451767.1
 
Nonsense mediated decay
H0YJL7 -CDS 5' incomplete
ENST00000555565.1TDP1-015524No protein-
 
Processed transcript
---
ENST00000553569.1TDP1-012879No protein-
 
Retained intron
---
Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,894 bps, Translation length: 578 residues

Version

ENST00000555880.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000411248 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.