Description
tyrosyl-DNA phosphodiesterase 1 [Source:HGNC Symbol;Acc:18884]
Gene Synonyms
FLJ11090, SCAN1
Location
Chromosome 14: 90,422,295-90,511,106 forward strand.
About this transcript
This transcript has 17 exons, is annotated with 9 domains and features, is associated with 37045 variant alleles and maps to 601 oligo probes.
Gene
This transcript is a product of gene ENSG00000042088.9 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000335725.4 | TDP1-001 | 3696 | 608aa | ENSP00000337353.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9888 | B3KN41 G3V2J6 G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 Q9NUW8 | NM_018319.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000393452.3 | TDP1-003 | 2370 | 589aa | ENSP00000377098.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E7EPD8 G3V2J6 G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000357382.3 | TDP1-201 | 2210 | 369aa | ENSP00000349952.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KN41 Q86TV8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000393454.2 | TDP1-006 | 2068 | 608aa | ENSP00000377099.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS9888 | B3KN41 G3V2J6 G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 Q9NUW8 | NM_001008744.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000555880.1 | TDP1-007 | 1894 | 578aa | ENSP00000450628.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2F4 G3V2J6 G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000556063.1 | TDP1-008 | 1076 | 281aa | ENSP00000450795.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000554180.1 | TDP1-009 | 910 | 279aa | ENSP00000450872.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553527.1 | TDP1-013 | 910 | 146aa | ENSP00000451358.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Q0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553617.1 | TDP1-010 | 876 | 219aa | ENSP00000450708.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V2J6 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556867.1 | TDP1-011 | 748 | 151aa | ENSP00000452279.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Q0 G3V5B8 G3V5F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000553989.1 | TDP1-014 | 728 | 147aa | ENSP00000452333.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Q0 G3V5F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000556498.1 | TDP1-017 | 597 | 161aa | ENSP00000452183.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G3V3Q0 G3V554 G3V5B8 G3V5F9 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000554976.1 | TDP1-002 | 3040 | 191aa | ENSP00000452042.1 | Nonsense mediated decay | G3V3Q0 G3V4W8 G3V554 G3V5B8 G3V5F9 | - | - | |
| ENST00000545686.2 | TDP1-004 | 2488 | 298aa | ENSP00000444587.2 | Nonsense mediated decay | G3V2U6 G3V3Q0 G3V554 G3V5B8 G3V5F9 Q9BRS7 | - | - | |
| ENST00000555178.1 | TDP1-005 | 2200 | 259aa | ENSP00000452363.1 | Nonsense mediated decay | G3V3Q0 G3V554 G3V5B8 G3V5F9 G3V5H9 | - | - | |
| ENST00000557782.1 | TDP1-016 | 318 | 51aa | ENSP00000451767.1 | Nonsense mediated decay | H0YJL7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000555565.1 | TDP1-015 | 524 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000553569.1 | TDP1-012 | 879 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |