Transcript: ENST00000043402.7 RTN4R-001

Description

reticulon 4 receptor [Source:HGNC Symbol;Acc:18601]

Gene Synonyms

NGR, NOGOR

Location

About this transcript

This transcript has 2 exons, is annotated with 25 domains and features, is associated with 13240 variant alleles and maps to 266 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000043402.7	RTN4R-001	2157	473aa	ENSP00000043402.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13777	Q9BZR6	NM_023004.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000425986.1	RTN4R-003	1973	559aa	ENSP00000403535.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000416372.1	RTN4R-002	1777	493aa	ENSP00000396872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000469601.1	RTN4R-006	672	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474642.1	RTN4R-007	559	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463936.1	RTN4R-005	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,157 bps, Translation length: 473 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BZR6

CCDS

This transcript is a member of the Human CCDS set: CCDS13777

Version

ENST00000043402.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000318950 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.