Transcript: ENST00000344949.5 TBC1D23-001

Description

TBC1 domain family, member 23 [Source:HGNC Symbol;Acc:25622]

Gene Synonyms

FLJ11046, NS4ATP1

Location

Chromosome 3: 99,979,845-100,044,095 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 11 domains and features, is associated with 26804 variant alleles and maps to 537 oligo probes.

Gene

This transcript is a product of gene ENSG00000036054.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394144.4	TBC1D23-002	3677	699aa	ENSP00000377700.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56265	B3KS68 Q9NUY8	NM_001199198.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344949.5	TBC1D23-001	3656	684aa	ENSP00000340693.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2936	B3KS68 Q9NUY8	NM_018309.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000475134.1	TBC1D23-004	2074	562aa	ENSP00000418059.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KS68 E9PGE5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485687.1	TBC1D23-008	587	189aa	ENSP00000417487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAM5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471098.1	TBC1D23-006	559	171aa	ENSP00000418714.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9IZ32	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000486274.1	TBC1D23-005	4054	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471273.1	TBC1D23-003	2304	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496167.1	TBC1D23-009	568	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484231.1	TBC1D23-007	662	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 3,656 bps, Translation length: 684 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NUY8

CCDS

This transcript is a member of the Human CCDS set: CCDS2936

Version

ENST00000344949.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353149 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000344949.5 TBC1D23-001

Summary