Description
sorting nexin 1 [Source:HGNC Symbol;Acc:11172]
Gene Synonyms
HsT17379, MGC8664, SNX1A, VPS5, Vps5
Location
Chromosome 15: 64,424,028-64,424,575 forward strand.
About this transcript
This transcript has 2 exons, is associated with 236 variant alleles and maps to 58 oligo probes.
Gene
This transcript is a product of gene ENSG00000028528.10 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000353874.4 | SNX1-201 | 8077 | 474aa | ENSP00000326668.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A6NKH4 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000261889.5 | SNX1-003 | 3373 | 557aa | ENSP00000261889.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58371 | H0YKT3 Q13596 | NM_003099.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000559844.1 | SNX1-001 | 1971 | 522aa | ENSP00000453785.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32266 | H0YK42 Q13596 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000560829.1 | SNX1-004 | 1869 | 304aa | ENSP00000452651.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YK42 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000561026.1 | SNX1-002 | 1374 | 457aa | ENSP00000453567.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS32268 | H0YK42 Q13596 | NM_148955.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000560861.1 | SNX1-010 | 850 | 70aa | ENSP00000452931.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YKT3 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000558040.1 | SNX1-009 | 774 | 128aa | ENSP00000452668.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H0YK58 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000559061.1 | SNX1-008 | 550 | 19aa | ENSP00000452652.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000380285.3 | SNX1-005 | 8119 | 102aa | ENSP00000369638.3 | Nonsense mediated decay | J3KPH4 | - | - | |
| ENST00000560260.1 | SNX1-006 | 1326 | 107aa | ENSP00000452759.1 | Nonsense mediated decay | H0YKD5 | - | - | |
| ENST00000559389.1 | SNX1-007 | 753 | 111aa | ENSP00000452852.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000559339.1 | SNX1-012 | 101 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000559961.1 | SNX1-014 | 712 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000559401.1 | SNX1-013 | 408 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |