Transcript: ENST00000316637.5 DEF6-001

Description

differentially expressed in FDCP 6 homolog (mouse) [Source:HGNC Symbol;Acc:2760]

Gene Synonyms

IBP, SLAT, SWAP70L

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 9491 variant alleles and maps to 528 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316637.5	DEF6-001	2262	631aa	ENSP00000319831.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4802	Q9H4E7	NM_022047.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542066.1	DEF6-201	2006	376aa	ENSP00000442166.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H853	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444278.1	DEF6-002	387	129aa	ENSP00000415357.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000468102.1	DEF6-003	450	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,262 bps, Translation length: 631 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H4E7

CCDS

This transcript is a member of the Human CCDS set: CCDS4802

Version

ENST00000316637.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000040276 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.