Human (GRCh37.p13)
Description

ATPase, Ca++ transporting, type 2C, member 1 [Source:HGNC Symbol;Acc:13211]

Gene Synonyms

ATP2C1A, BCPM, HHD, KIAA1347, PMR1, PMR1L, SPCA1, hSPCA1

About this transcript

This transcript has 16 exons, is associated with 16554 variant alleles and maps to 666 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000510168.1ATP2C1-0085067919aaENSP00000427461.1
 
Protein coding
CCDS46914D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
-GENCODE basic
ENST00000508532.1ATP2C1-0014969919aaENSP00000424783.1
 
Protein coding
CCDS46914D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
NM_001199179.1GENCODE basic
ENST00000505330.1ATP2C1-0094888903aaENSP00000423774.1
 
Protein coding
CCDS56281D6R9U9 D6RGE9 P98194
NM_001199181.1GENCODE basic
ENST00000428331.2ATP2C1-0114795919aaENSP00000395809.2
 
Protein coding
CCDS46914D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
NM_014382.3GENCODE basic
ENST00000504948.1ATP2C1-0044714903aaENSP00000423330.1
 
Protein coding
CCDS56281D6R9U9 D6RGE9 P98194
NM_001199184.1GENCODE basic
ENST00000507488.2ATP2C1-0103579923aaENSP00000421326.2
 
Protein coding
CCDS56280D6R9U9 D6RGE9 P98194
NM_001199180.1GENCODE basic
ENST00000504381.1ATP2C1-0073498894aaENSP00000425320.1
 
Protein coding
D6R9U9 E7ERC6 NM_001199182.1GENCODE basic
ENST00000328560.8ATP2C1-0023484888aaENSP00000329664.8
 
Protein coding
CCDS46913D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
NM_001199185.1GENCODE basic
ENST00000393221.4ATP2C1-2013446973aaENSP00000376914.4
 
Protein coding
CCDS56278D6R9U9 D6RGE9 P98194
-GENCODE basic
ENST00000513801.1ATP2C1-0033439923aaENSP00000422872.1
 
Protein coding
CCDS56280D6R9U9 D6RGE9 P98194
NM_001199183.1GENCODE basic
ENST00000359644.3ATP2C1-0053401949aaENSP00000352665.3
 
Protein coding
CCDS33856D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
NM_001001486.1GENCODE basic
ENST00000422190.2ATP2C1-0203386939aaENSP00000402677.2
 
Protein coding
CCDS46912D6R9U9 D6REJ1 D6RGE9
D6RHV9 P98194
NM_001001487.1GENCODE basic
ENST00000533801.2ATP2C1-2023277944aaENSP00000432956.2
 
Protein coding
CCDS56279D6R9U9 E7ERC6 -GENCODE basic
ENST00000504612.1ATP2C1-0063148903aaENSP00000425228.1
 
Protein coding
D6R9U9 -CDS 5' incomplete
ENST00000508660.1ATP2C1-017943314aaENSP00000424930.1
 
Protein coding
--CDS 5' and 3' incomplete
ENST00000515854.1ATP2C1-019561131aaENSP00000422890.1
 
Protein coding
D6R9U9 -CDS 3' incomplete
ENST00000509662.1ATP2C1-014559102aaENSP00000426849.1
 
Protein coding
D6REJ1 D6RGE9 -CDS 3' incomplete
ENST00000505072.1ATP2C1-021556120aaENSP00000427625.1
 
Protein coding
D6REJ1 D6RGE9 D6RHV9
-CDS 3' incomplete
ENST00000508297.1ATP2C1-01554082aaENSP00000421261.1
 
Protein coding
D6RGE9 -CDS 3' incomplete
ENST00000504571.1ATP2C1-013786215aaENSP00000422489.1
 
Nonsense mediated decay
H0Y8X9 -CDS 5' incomplete
ENST00000507194.1ATP2C1-01865150aaENSP00000427087.1
 
Nonsense mediated decay
H0YAH2 -CDS 5' incomplete
ENST00000509150.1ATP2C1-023573No protein-
 
Processed transcript
---
ENST00000514654.1ATP2C1-0124730No protein-
 
Retained intron
---
ENST00000513636.1ATP2C1-016590No protein-
 
Retained intron
---
ENST00000510774.1ATP2C1-022555No protein-
 
Retained intron
---
Statistics

Exons: 16, Coding exons: 0, Transcript length: 4,730 bps,

Version

ENST00000514654.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000356652 (version 2)