Transcript: ENST00000229471.4 FYN-029

Description

FYN oncogene related to SRC, FGR, YES [Source:HGNC Symbol;Acc:4037]

Gene Synonyms

MGC45350, SLK, SYN, p59-FYN

Location

Chromosome 6: 111,982,485-112,080,334 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 34 domains and features, is associated with 39092 variant alleles and maps to 586 oligo probes.

Gene

This transcript is a product of gene ENSG00000010810.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354650.3	FYN-001	3628	537aa	ENSP00000346671.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5094	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	NM_002037.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368682.3	FYN-002	3234	534aa	ENSP00000357671.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5095	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368678.4	FYN-017	2573	534aa	ENSP00000357667.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5095	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229470.5	FYN-201	2482	485aa	ENSP00000229470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJX7 Q5R3A8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356013.2	FYN-202	2473	482aa	ENSP00000348295.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5096	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000368667.2	FYN-014	2416	537aa	ENSP00000357656.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5094	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538466.1	FYN-203	2061	534aa	ENSP00000440646.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5095	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	NM_153047.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229471.4	FYN-029	2009	482aa	ENSP00000229471.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5096	E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23 P06241	NM_153048.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518295.1	FYN-022	1012	153aa	ENSP00000428695.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM0 E5RFM4 E5RFM6 E5RGM6 E5RGT0 E5RHF7 E5RHX7 E5RI25 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523238.1	FYN-012	1012	152aa	ENSP00000430364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM0 E5RFM4 E5RFM6 E5RGM6 E5RHF7 E5RHX7 E5RI25 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462856.2	FYN-011	989	232aa	ENSP00000427993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM0 E5RFM4 E5RFM6 E5RFS5 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520518.1	FYN-020	864	186aa	ENSP00000429294.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM0 E5RFM4 E5RFM6 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RIX5 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000462598.3	FYN-010	825	70aa	ENSP00000429590.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000484067.2	FYN-018	712	106aa	ENSP00000428983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM6 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517419.1	FYN-028	610	175aa	ENSP00000429866.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM0 E5RFM4 E5RFM6 E5RGM6 E5RGT0 E5RH71 E5RHF7 E5RHX7 E5RI25 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521062.1	FYN-013	609	103aa	ENSP00000428042.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM6 E5RJX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523570.1	FYN-023	597	116aa	ENSP00000428045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM4 E5RFM6 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000518630.1	FYN-019	571	118aa	ENSP00000429813.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM4 E5RFM6 E5RHF7 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523574.1	FYN-025	569	139aa	ENSP00000429992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM4 E5RFM6 E5RGM6 E5RHF7 E5RHX7 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524310.1	FYN-026	541	145aa	ENSP00000428493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RFM4 E5RFM6 E5RGM6 E5RHF7 E5RHX7 E5RI25 E5RJX7 E5RK23	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000487824.2	FYN-024	518	64aa	ENSP00000430455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJX7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476769.2	FYN-016	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491885.2	FYN-015	649	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471959.2	FYN-008	932	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523322.1	FYN-027	909	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000496864.2	FYN-004	839	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467921.2	FYN-009	799	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495927.1	FYN-006	755	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000521361.1	FYN-021	723	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467899.1	FYN-005	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495935.1	FYN-007	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,009 bps, Translation length: 482 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P06241

CCDS

This transcript is a member of the Human CCDS set: CCDS5096

Version

ENST00000229471.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378266 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000229471.4 FYN-029

Summary