Transcript: ENST00000310417.5 HHATL-001

Description

hedgehog acyltransferase-like [Source:HGNC Symbol;Acc:13242]

Gene Synonyms

C3orf3, GUP1, KIAA1173, MBOAT3, MSTP002, OACT3

Location

Chromosome 3: 42,734,155-42,743,013 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 14 domains and features, is associated with 4516 variant alleles and maps to 581 oligo probes.

Gene

This transcript is a product of gene ENSG00000010282.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441594.1	HHATL-002	1865	504aa	ENSP00000405423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2704	C9JEF1 C9JHL0 C9JL39 Q9HCP6	NM_020707.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000310417.5	HHATL-001	1750	504aa	ENSP00000310621.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2704	C9JEF1 C9JHL0 C9JL39 Q9HCP6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457462.1	HHATL-008	996	261aa	ENSP00000403787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JJ25 C9JKQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000416756.1	HHATL-009	915	231aa	ENSP00000395779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEF1 C9JHL0 C9JL39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000455195.1	HHATL-011	690	203aa	ENSP00000415351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JEF1 C9JL39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442469.1	HHATL-013	491	117aa	ENSP00000408999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JL39	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417472.1	HHATL-010	487	116aa	ENSP00000413810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKQ1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426666.1	HHATL-005	461	124aa	ENSP00000401568.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480939.1	HHATL-007	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466007.1	HHATL-004	702	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497000.1	HHATL-014	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000490003.1	HHATL-003	587	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 1,750 bps, Translation length: 504 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCP6

CCDS

This transcript is a member of the Human CCDS set: CCDS2704

Version

ENST00000310417.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256648 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000310417.5 HHATL-001

Summary