Transcript: ENST00000375375.3 PAX7-001

Description

paired box 7 [Source:HGNC Symbol;Acc:8621]

Gene Synonyms

HUP1, Hup1, PAX7B, RMS2

Location

About this transcript

This transcript has 8 exons, is annotated with 22 domains and features, is associated with 49755 variant alleles and maps to 389 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000420770.2	PAX7-002	5538	505aa	ENSP00000403389.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44074	P23759	NM_001135254.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375375.3	PAX7-001	2260	520aa	ENSP00000364524.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS186	P23759	NM_013945.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000400661.3	PAX7-003	1700	518aa	ENSP00000383502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44075	P23759	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,260 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23759

CCDS

This transcript is a member of the Human CCDS set: CCDS186

Version

ENST00000375375.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000006928 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.