Transcript: ENST00000575441.1 MMP25-004

Description

matrix metallopeptidase 25 [Source:HGNC Symbol;Acc:14246]

Gene Synonyms

MMP-25, MMP20, MMP20A, MMPL1, MT-MMP 6, MT-MMP6, MT6-MMP, MT6MMP, MTMMP6

Location

About this transcript

This transcript has 4 exons, is associated with 1060 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336577.4	MMP25-001	3554	562aa	ENSP00000337816.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10492	Q9NPA2	NM_022468.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000570755.1	MMP25-003	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000575441.1	MMP25-004	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 710 bps,

Version

ENST00000575441.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000437119 (version 1)