Transcript: ENST00000423670.1 SCYL3-002

Description

SCY1-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:19285]

Gene Synonyms

PACE-1, PACE1

Location

Chromosome 1: 169,823,652-169,863,408 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 16832 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000000457.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367772.4	SCYL3-201	3477	742aa	ENSP00000356746.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1287	Q8IZE3	NM_181093.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367771.6	SCYL3-001	6364	688aa	ENSP00000356745.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1286	B4E2Y0 Q8IZE3	NM_020423.6	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000367770.1	SCYL3-003	2916	742aa	ENSP00000356744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1287	Q8IZE3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423670.1	SCYL3-002	2077	588aa	ENSP00000407993.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000470238.1	SCYL3-004	1538	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,077 bps, Translation length: 588 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000423670.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000087549 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000423670.1 SCYL3-002

Summary