Description
Wolf-Hirschhorn syndrome candidate 1 [Source:HGNC Symbol;Acc:12766]
Gene Synonyms
KIAA1090, MMSET, NSD2, REIIBP, TRX5, WHS
Location
Chromosome 4: 1,894,572-1,983,934 forward strand.
About this transcript
This transcript has 24 exons, is annotated with 51 domains and features, is associated with 44041 variant alleles and maps to 862 oligo probes.
Gene
This transcript is a product of gene ENSG00000109685.13 Show transcript tableHide transcript table
Show/hide columns (1 hidden)
- Transcript ID
- Name
- bp
- Protein
- Translation ID
- Biotype
- CCDS
- UniProt Match
- RefSeq
- Flags
| Transcript ID | Name | bp | Protein | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| ENST00000382895.3 | WHSC1-008 | 7827 | 1365aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33940 | D6R9V2 D6RFE7 D6RIS1 O96028 | NM_133330.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000503128.1 | WHSC1-004 | 8568 | 647aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3356 | D6R9V2 D6RFE7 D6RIS1 O96028 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000398261.1 | WHSC1-203 | 8390 | 647aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3356 | D6R9V2 D6RFE7 D6RIS1 O96028 | NM_133334.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000382892.2 | WHSC1-202 | 7706 | 1365aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33940 | D6R9V2 D6RFE7 D6RIS1 O96028 | NM_133331.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000382891.5 | WHSC1-201 | 7534 | 1365aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33940 | D6R9V2 D6RFE7 D6RIS1 O96028 | NM_133335.3 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000420906.2 | WHSC1-006 | 5109 | 629aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46999 | D6R9V2 D6RFE7 D6RIS1 O96028 Q05CW4 | NM_007331.1 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000508803.1 | WHSC1-011 | 4251 | 1365aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33940 | D6R9V2 D6RFE7 D6RIS1 O96028 | NM_001042424.2 | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000514045.1 | WHSC1-010 | 3964 | 629aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46999 | D6R9V2 D6RFE7 D6RIS1 O96028 Q05CW4 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000382888.3 | WHSC1-005 | 2666 | 713aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | O96028 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000436793.1 | WHSC1-204 | 1316 | 273aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFE7 D6RIS1 O96028 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000509115.1 | WHSC1-015 | 1212 | 392aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6R9V2 D6RFE7 D6RIS1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000514329.1 | WHSC1-024 | 851 | 284aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000515806.1 | WHSC1-014 | 816 | 199aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFE7 D6RIS1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000507820.1 | WHSC1-013 | 528 | 37aa | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RFE7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000312087.6 | WHSC1-007 | 8050 | 647aa | Nonsense mediated decay | CCDS3356 | D6R9V2 D6RFE7 D6RIS1 O96028 | - | - |
| ENST00000353275.5 | WHSC1-002 | 7980 | 647aa | Nonsense mediated decay | CCDS3356 | D6R9V2 D6RFE7 D6RIS1 O96028 | - | - |
| ENST00000512700.1 | WHSC1-012 | 1095 | 273aa | Nonsense mediated decay | D6RFE7 D6RIS1 O96028 | - | - | |
| ENST00000511904.1 | WHSC1-016 | 690 | 163aa | Nonsense mediated decay | H0Y9L4 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000482415.2 | WHSC1-003 | 3602 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000505643.1 | WHSC1-022 | 990 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000503207.1 | WHSC1-021 | 812 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000513726.1 | WHSC1-017 | 648 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000502425.1 | WHSC1-023 | 421 | No protein | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000508355.1 | WHSC1-009 | 2092 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000508299.1 | WHSC1-019 | 592 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000515695.1 | WHSC1-018 | 571 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000507094.1 | WHSC1-020 | 563 | No protein | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
Showing 1 to 27 of 27 entries