Transcript: ENST00000379328.3 GATA3-001

Description

GATA binding protein 3 [Source:HGNC Symbol;Acc:4172]

Gene Synonyms

HDR, HDRS

Location

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features, is associated with 13311 variant alleles and maps to 562 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379328.3	GATA3-001	3078	444aa	ENSP00000368632.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31143	P23771	NM_002051.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000346208.3	GATA3-002	2654	443aa	ENSP00000341619.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7083	P23771	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461472.1	GATA3-004	895	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481743.1	GATA3-003	442	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 3,078 bps, Translation length: 444 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23771

CCDS

This transcript is a member of the Human CCDS set: CCDS31143

Version

ENST00000379328.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046718 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.