Transcript: ENST00000375687.4 ASXL1-001

Description

additional sex combs like 1 (Drosophila) [Source:HGNC Symbol;Acc:18318]

Gene Synonyms

BOPS, KIAA0978, MDS

Location

Chromosome 20: 30,946,155-31,027,122 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 42616 variant alleles and maps to 776 oligo probes.

Gene

This transcript is a product of gene ENSG00000171456.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375687.4	ASXL1-001	7031	1541aa	ENSP00000364839.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13201	Q8IXJ9	NM_015338.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000306058.5	ASXL1-201	6591	1536aa	ENSP00000305119.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NIZ6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000542461.1	ASXL1-202	983	84aa	ENSP00000438654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6P1M8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000375689.1	ASXL1-002	812	81aa	ENSP00000364841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWS8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553345.1	ASXL1-006	809	176aa	ENSP00000451444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3V0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497249.1	ASXL1-003	284	74aa	ENSP00000451216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470145.1	ASXL1-004	1073	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555343.1	ASXL1-005	1034	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555564.1	ASXL1-007	658	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 7,031 bps, Translation length: 1,541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IXJ9

CCDS

This transcript is a member of the Human CCDS set: CCDS13201

Version

ENST00000375687.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000078624 (version 2)

Annotation Attributes

dotter confirmed [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000375687.4 ASXL1-001

Summary