Transcript: ENST00000373509.5 PIM1-003

Description

pim-1 oncogene [Source:HGNC Symbol;Acc:8986]

Gene Synonyms

PIM

Location

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 3718 variant alleles and maps to 541 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373509.5	PIM1-003	2650	313aa	ENSP00000362608.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4830	P11309	NM_002648.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000468243.1	PIM1-004	818	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479509.1	PIM1-001	675	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,650 bps, Translation length: 313 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P11309

CCDS

This transcript is a member of the Human CCDS set: CCDS4830

Version

ENST00000373509.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000043903 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.