Transcript: ENST00000371100.4 GNAS-001

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Description

GNAS complex locus [Source:HGNC Symbol;Acc:4392]

Gene Synonyms

AHO, C20orf45, GNAS1, GNASXL, GPSA, GSA, GSP, NESP, NESP55, PHP1A, PHP1B, PHP1C, POH, SCG6

Location

Chromosome 20: 57,427,769-57,486,247 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 33 domains and features, is associated with 31569 variant alleles and maps to 845 oligo probes.

Gene

This transcript is a product of gene ENSG00000087460.19 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371100.4	GNAS-001	4029	1037aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46622	B0AZR9 Q5JWF2 S4R379 S4R3E3 S4R3F1 S4R3V9 S4R3W4	NM_080425.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371099.2	GNAS-058	3709	720aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371102.4	GNAS-009	3438	1023aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWF2 S4R3S2 S4R415	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000313949.7	GNAS-002	2578	245aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13471	A2A2S1 O95467	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371075.3	GNAS-014	2551	245aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13471	A2A2S1 O95467	NM_016592.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000354359.7	GNAS-018	1975	395aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46623	P63092 S4R301 S4R330	NM_001077488.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371085.3	GNAS-015	1972	394aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13472	B0AZR9 P63092 S4R379 S4R3E3 S4R3F1 S4R3V9 S4R3W4	NM_000516.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371095.3	GNAS-017	1931	380aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46624	P63092 S4R3S2 S4R415	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000306120.3	GNAS-050	1878	625aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P84996	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000265620.7	GNAS-035	1866	379aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42892	P63092 S4R3F3	NM_080426.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000371098.2	GNAS-025	1719	245aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13471	A2A2S1 O95467	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000306090.10	GNAS-201	1642	380aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46624	P63092 S4R3S2 S4R415	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423897.1	GNAS-049	736	93aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R391	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000371081.1	GNAS-038	730	87aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWD1 S4R391	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000419558.1	GNAS-023	729	113aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000604005.1	GNAS-071	693	160aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3E3 S4R3F1 S4R3V9 S4R3W4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000338783.6	GNAS-021	641	61aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2R6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000453292.1	GNAS-022	632	166aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2S1	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000450130.1	GNAS-036	595	199aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000349036.3	GNAS-037	581	193aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5JWE9 S4R301 S4R330	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000603546.1	GNAS-063	573	120aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		S4R3F1 S4R3V9 S4R3W4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464624.2	GNAS-059	3764	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481768.1	GNAS-012	1903	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477931.1	GNAS-016	1663	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480975.1	GNAS-007	1534	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491348.1	GNAS-026	1068	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464960.1	GNAS-040	986	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488652.1	GNAS-029	953	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470512.1	GNAS-006	913	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472183.1	GNAS-027	911	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488546.1	GNAS-003	897	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480232.1	GNAS-055	893	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476935.1	GNAS-030	828	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493744.1	GNAS-048	812	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492907.1	GNAS-013	790	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481039.1	GNAS-004	756	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467321.1	GNAS-053	733	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000485673.1	GNAS-005	715	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482112.1	GNAS-031	704	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469431.1	GNAS-011	702	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490374.1	GNAS-033	675	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484504.1	GNAS-046	662	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468895.1	GNAS-052	583	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464788.1	GNAS-054	583	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494081.1	GNAS-042	557	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467227.1	GNAS-034	543	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478585.1	GNAS-008	543	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493958.1	GNAS-043	534	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462499.1	GNAS-032	492	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461152.1	GNAS-056	278	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496934.1	GNAS-020	2837	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476196.1	GNAS-041	1839	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487862.1	GNAS-019	1782	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483387.1	GNAS-047	593	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487981.1	GNAS-057	581	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475610.1	GNAS-044	493	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479025.1	GNAS-045	466	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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Statistics

Exons: 13, Coding exons: 13, Transcript length: 4,029 bps, Translation length: 1,037 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5JWF2

CCDS

This transcript is a member of the Human CCDS set: CCDS46622

Version

ENST00000371100.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000080417 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000371100.4 GNAS-001

Summary