Transcript: ENST00000342505.4 JAK1-001

Description

Janus kinase 1 [Source:HGNC Symbol;Acc:6190]

Gene Synonyms

JAK1A, JAK1B, JTK3

Location

About this transcript

This transcript has 25 exons, is annotated with 39 domains and features, is associated with 58183 variant alleles and maps to 931 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000342505.4	JAK1-001	5047	1154aa	ENSP00000343204.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41346	P23458	NM_002227.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000465376.1	JAK1-006	814	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494904.1	JAK1-004	691	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471473.1	JAK1-005	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467764.1	JAK1-003	528	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481702.1	JAK1-002	314	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 24, Transcript length: 5,047 bps, Translation length: 1,154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23458

CCDS

This transcript is a member of the Human CCDS set: CCDS41346

Version

ENST00000342505.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000025791 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.