Transcript: ENST00000341105.2 GATA2-001

Description

GATA binding protein 2 [Source:HGNC Symbol;Acc:4171]

Gene Synonyms

DCML, MONOMAC, NFE1B

Location

Chromosome 3: 128,198,270-128,212,028 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 24 domains and features, is associated with 8315 variant alleles and maps to 658 oligo probes.

Gene

This transcript is a product of gene ENSG00000179348.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341105.2	GATA2-001	3367	480aa	ENSP00000345681.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3049	C9J965 P23769	NM_032638.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000430265.2	GATA2-003	2525	466aa	ENSP00000400259.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46903	C9J965 P23769	NM_001145662.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000487848.1	GATA2-002	1878	480aa	ENSP00000417074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3049	C9J965 P23769	NM_001145661.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000492608.1	GATA2-007	844	150aa	ENSP00000418132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J965	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000498200.1	GATA2-006	563	8aa	ENSP00000419532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000489987.1	GATA2-005	1433	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 3,367 bps, Translation length: 480 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23769

CCDS

This transcript is a member of the Human CCDS set: CCDS3049

Version

ENST00000341105.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000356925 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000341105.2 GATA2-001

Summary