Transcript: ENST00000326873.7 STK11-001

Description

serine/threonine kinase 11 [Source:HGNC Symbol;Acc:11389]

Gene Synonyms

LKB1, PJS, hLKB1

Location

Chromosome 19: 1,205,740-1,228,428 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 19222 variant alleles and maps to 647 oligo probes.

Gene

This transcript is a product of gene ENSG00000118046.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326873.7	STK11-001	3328	433aa	ENSP00000324856.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45896	Q15831 Q9NS52	NM_000455.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000586243.1	STK11-009	844	282aa	ENSP00000467240.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000585851.1	STK11-004	505	153aa	ENSP00000467912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EQN8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000593219.1	STK11-008	1338	101aa	ENSP00000466610.1	Nonsense mediated decay		K7EMR0	-	-
ENST00000585748.1	STK11-012	400	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000585465.1	STK11-003	3553	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000589152.1	STK11-002	3365	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000591133.1	STK11-006	894	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000586358.1	STK11-005	761	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 3,328 bps, Translation length: 433 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15831

CCDS

This transcript is a member of the Human CCDS set: CCDS45896

Version

ENST00000326873.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000449839 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000326873.7 STK11-001

Summary