Transcript: ENST00000322652.5 SUZ12-001

Description

SUZ12 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:17101]

Gene Synonyms

CHET9, JJAZ1, KIAA0160

Location

About this transcript

This transcript has 16 exons, is annotated with 5 domains and features, is associated with 30731 variant alleles and maps to 773 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000322652.5	SUZ12-001	4491	739aa	ENSP00000316578.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11270	Q15022	NM_015355.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000580398.1	SUZ12-002	3977	716aa	ENSP00000463936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQW9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000494429.2	SUZ12-003	1895	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000578106.1	SUZ12-004	1367	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 4,491 bps, Translation length: 739 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q15022

CCDS

This transcript is a member of the Human CCDS set: CCDS11270

Version

ENST00000322652.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000256260 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.