Transcript: ENST00000318522.5 EML4-001

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Description

echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:1316]

Gene Synonyms

C2orf2, ELP120, EMAP-4, EMAPL4, ROPP120

Location

Chromosome 2: 42,396,490-42,559,688 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 34 domains and features, is associated with 93017 variant alleles and maps to 935 oligo probes.

Gene

This transcript is a product of gene ENSG00000143924.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000318522.5	EML4-001	5549	981aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1807	F2Z2B5 Q9HC35	NM_019063.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000401738.3	EML4-003	3797	992aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBZ0 F2Z2B5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000402711.2	EML4-002	3568	923aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46266	F2Z2B5 Q9HC35	NM_001145076.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000453191.2	EML4-201	1455	245aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z2B5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000482660.1	EML4-009	584	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472632.1	EML4-010	515	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000406175.3	EML4-006	4622	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480320.1	EML4-005	1932	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000409040.1	EML4-011	962	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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Statistics

Exons: 23, Coding exons: 23, Transcript length: 5,549 bps, Translation length: 981 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HC35

CCDS

This transcript is a member of the Human CCDS set: CCDS1807

Version

ENST00000318522.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000250463 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000318522.5 EML4-001

Summary