Transcript: ENST00000303115.3 IL7R-001

Description

interleukin 7 receptor [Source:HGNC Symbol;Acc:6024]

Gene Synonyms

CD127, CDW127, IL-7R-alpha, IL7RA, ILRA

Location

Chromosome 5: 35,856,951-35,879,705 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 10 domains and features, is associated with 12135 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000168685.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000303115.3	IL7R-001	4626	459aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3911	D6RCR9 D6RG28 P16871	NM_002185.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000343305.4	IL7R-201	1708	262aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCR9 D6RG28 D6RGV2 D9N160 H0YA41	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000506850.1	IL7R-003	1004	261aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCR9 D6RG28 D6RGV2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000505093.1	IL7R-010	917	65aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YA41	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000505875.1	IL7R-009	626	208aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0Y8G3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000511982.1	IL7R-007	612	150aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCR9 D6RDM4 D6RG28	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000508941.1	IL7R-004	562	59aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCR9 D6RG28	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000515665.1	IL7R-006	551	52aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCR9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000514217.1	IL7R-002	1287	180aa	Nonsense mediated decay		B8YG18 D6RCR9 D6RG28	-	-
ENST00000511031.1	IL7R-005	515	No protein	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509668.1	IL7R-008	552	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Loading component

Statistics

Exons: 8, Coding exons: 8, Transcript length: 4,626 bps, Translation length: 459 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P16871

CCDS

This transcript is a member of the Human CCDS set: CCDS3911

Version

ENST00000303115.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000207577 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000303115.3 IL7R-001

Summary