Transcript: ENST00000285071.4 FLCN-001

Description

folliculin [Source:HGNC Symbol;Acc:27310]

Gene Synonyms

BHD, FLCL, MGC17998, MGC23445

Location

Chromosome 17: 17,115,526-17,140,453 reverse strand.

About this transcript

This transcript has 14 exons, is annotated with 5 domains and features, is associated with 14189 variant alleles and maps to 485 oligo probes.

Gene

This transcript is a product of gene ENSG00000154803.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285071.4	FLCN-001	3638	579aa	ENSP00000285071.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32579	C9J4C4 J3QQZ7 Q8NFG4	NM_144997.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000389169.5	FLCN-002	1692	342aa	ENSP00000373821.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32580	C9J4C4 J3QQZ7 Q8NFG4	NM_144606.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000417064.1	FLCN-006	757	153aa	ENSP00000410410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J4C4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000461699.1	FLCN-008	243	37aa	ENSP00000463970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QQZ7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000389168.2	FLCN-004	3359	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466317.1	FLCN-005	2684	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000389171.4	FLCN-003	2523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000480316.1	FLCN-009	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000473853.1	FLCN-007	384	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000577591.1	FLCN-010	296	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 11, Transcript length: 3,638 bps, Translation length: 579 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NFG4

CCDS

This transcript is a member of the Human CCDS set: CCDS32579

Version

ENST00000285071.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000131577 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000285071.4 FLCN-001

Summary