Transcript: ENST00000282030.5 SETBP1-001

Description

SET binding protein 1 [Source:HGNC Symbol;Acc:15573]

Gene Synonyms

KIAA0437, SEB

Location

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 164310 variant alleles and maps to 541 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282030.5	SETBP1-001	9899	1596aa	ENSP00000282030.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11923	K7ES17 Q9Y6X0	NM_015559.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000426838.4	SETBP1-002	1785	242aa	ENSP00000390687.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45859	K7ES17 Q9Y6X0	NM_001130110.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000591940.1	SETBP1-003	762	137aa	ENSP00000468506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ES17	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 9,899 bps, Translation length: 1,596 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6X0

CCDS

This transcript is a member of the Human CCDS set: CCDS11923

Version

ENST00000282030.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000255854 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.