Transcript: ENST00000267163.4 RB1-002

Description

retinoblastoma 1 [Source:HGNC Symbol;Acc:9884]

Gene Synonyms

OSRC, RB, p105-Rb, pRb, pp110

Location

About this transcript

This transcript has 27 exons, is annotated with 12 domains and features, is associated with 77627 variant alleles and maps to 1092 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000267163.4	RB1-002	4840	928aa	ENSP00000267163.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31973	B4DRB3 P06400 P78495 Q6DUF0 Q6LE65 Q6LE77 Q6LE79 Q6LE80 Q6LE81 Q6LE82 Q7KZ60 Q7KZ61	NM_000321.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000467505.1	RB1-003	480	53aa	ENSP00000434702.1	Nonsense mediated decay		Q92728	-	-
ENST00000484879.1	RB1-001	1097	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531171.1	RB1-005	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480491.1	RB1-004	617	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525036.1	RB1-006	1490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 4,840 bps, Translation length: 928 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P06400

CCDS

This transcript is a member of the Human CCDS set: CCDS31973

Version

ENST00000267163.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000044884 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.