Transcript: ENST00000264122.4 CBLB-001

.

Description

Cbl proto-oncogene B, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:1542]

Gene Synonyms

Cbl-b, RNF56

Location

Chromosome 3: 105,374,305-105,587,887 reverse strand.

About this transcript

This transcript has 19 exons, is annotated with 29 domains and features, is associated with 90862 variant alleles and maps to 858 oligo probes.

Gene

This transcript is a product of gene ENSG00000114423.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264122.4	CBLB-001	6780	982aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2948	B5MC15 C9JU85 Q13191	NM_170662.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394030.2	CBLB-007	4475	321aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHA9 Q68CY2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000394027.3	CBLB-201	3430	960aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRB3 C9JU85 E7ENW2 E9PHA9 Q68CY2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000403724.1	CBLB-002	3350	770aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU85 Q13191	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000405772.1	CBLB-003	3237	810aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MC15 C9JU85	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000545639.1	CBLB-202	1632	227aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRB3 C9JU85 F5H4J9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000407712.1	CBLB-005	1493	197aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHA9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000447441.1	CBLB-010	944	139aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000443752.1	CBLB-008	561	139aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JU85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438603.1	CBLB-009	519	161aa	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRB3 C9JU85	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000476370.1	CBLB-006	4722	No protein	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

Export image

Statistics

Exons: 19, Coding exons: 18, Transcript length: 6,780 bps, Translation length: 982 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13191

CCDS

This transcript is a member of the Human CCDS set: CCDS2948

Version

ENST00000264122.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000319417 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

.

Personal Data

Favourite species

All species

Recent locations

Transcript: ENST00000264122.4 CBLB-001

Summary