Transcript: ENST00000256646.2 NOTCH2-001

Description

notch 2 [Source:HGNC Symbol;Acc:7882]

Gene Synonyms

AGS2, HJCYS, hN2

Location

About this transcript

This transcript has 34 exons, is annotated with 342 domains and features, is associated with 76098 variant alleles and maps to 1348 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000256646.2	NOTCH2-001	11389	2471aa	ENSP00000256646.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS908	Q04721 Q13560 Q9UFD5	NM_024408.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000602566.1	NOTCH2-006	5046	235aa	ENSP00000473427.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GN02	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000493703.1	NOTCH2-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478864.1	NOTCH2-003	520	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489731.1	NOTCH2-002	414	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479412.2	NOTCH2-004	3221	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 34, Transcript length: 11,389 bps, Translation length: 2,471 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q04721

CCDS

This transcript is a member of the Human CCDS set: CCDS908

Version

ENST00000256646.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000033679 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.