Transcript: ENST00000539976.1 MC1R-003

Description

melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor) [Source:HGNC Symbol;Acc:6929]

Gene Synonyms

CMM5, MSH-R, MSHR, SHEP2

Location

About this transcript

This transcript has 2 exons, is associated with 3307 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000555147.1	MC1R-001	3099	317aa	ENSP00000451605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56011	Q01726 Q1JUL4	NM_002386.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000555427.1	MC1R-002	3637	382aa	ENSP00000451760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4F0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539976.1	MC1R-003	2464	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,464 bps,

Version

ENST00000539976.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000400057 (version 1)