Transcript: ENST00000551765.1 GATC-001

Description

glutamyl-tRNA(Gln) amidotransferase, subunit C [Source:HGNC Symbol;Acc:25068]

Gene Synonyms

15E1.2, FLJ37000, gatC

Location

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 7564 variant alleles and maps to 376 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000551765.1	GATC-001	2081	136aa	ENSP00000446872.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31911	J3KMY1 O43716	NM_176818.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000229384.5	GATC-006	372	47aa	ENSP00000229384.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KMY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000548171.1	GATC-005	931	121aa	ENSP00000448397.1	Nonsense mediated decay		F8VRU3	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 2,081 bps, Translation length: 136 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43716

CCDS

This transcript is a member of the Human CCDS set: CCDS31911

Version

ENST00000551765.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000108981 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.