Transcript: ENST00000536229.3 SALL3-006

Description

spalt-like transcription factor 3 [Source:HGNC Symbol;Acc:10527]

Gene Synonyms

ZNF796

Location

Chromosome 18: 76,751,682-76,757,322 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 49 domains and features, is associated with 4989 variant alleles and maps to 303 oligo probes.

Gene

This transcript is a product of gene ENSG00000256463.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000537592.2	SALL3-001	3903	1300aa	ENSP00000441823.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12013	Q9BXA9	NM_171999.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536229.3	SALL3-006	3997	1095aa	ENSP00000439975.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000575389.2	SALL3-002	3996	1228aa	ENSP00000458360.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BXA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000573324.1	SALL3-003	838	150aa	ENSP00000461451.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000572928.1	SALL3-004	150	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 3,997 bps, Translation length: 1,095 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BXA9

Version

ENST00000536229.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446094 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000536229.3 SALL3-006

Summary