Transcript: ENST00000495808.1 ETV5-013

Description

ets variant 5 [Source:HGNC Symbol;Acc:3494]

Gene Synonyms

ERM

Location

Chromosome 3: 185,823,199-185,823,513 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 132 variant alleles and maps to 127 oligo probes.

Gene

This transcript is a product of gene ENSG00000244405.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306376.5	ETV5-001	4111	510aa	ENSP00000306894.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33906	C9J0Z2 C9J5A5 C9JMF0 P41161	NM_004454.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000434744.1	ETV5-002	2213	510aa	ENSP00000413755.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33906	C9J0Z2 C9J5A5 C9JMF0 P41161	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000537818.1	ETV5-201	1859	552aa	ENSP00000441737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7D7 C9J0Z2 C9J5A5 C9JMF0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440773.1	ETV5-003	574	150aa	ENSP00000389707.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0Z2 C9J5A5 C9JMF0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000413301.1	ETV5-005	573	132aa	ENSP00000405157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J5A5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000422039.1	ETV5-006	564	132aa	ENSP00000388737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JR66	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421809.1	ETV5-007	554	140aa	ENSP00000412171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J0Z2 C9J5A5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000433149.1	ETV5-011	366	89aa	ENSP00000399707.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000480706.1	ETV5-012	764	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000476890.1	ETV5-004	642	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489830.1	ETV5-010	614	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484223.1	ETV5-009	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472868.2	ETV5-014	238	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000475484.1	ETV5-008	472	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495808.1	ETV5-013	187	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 187 bps,

Version

ENST00000495808.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000344959 (version 1)

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Transcript: ENST00000495808.1 ETV5-013

Summary