Transcript: ENST00000406226.1 STON1-001

Description

stonin 1 [Source:HGNC Symbol;Acc:17003]

Gene Synonyms

SALF, SBLF, STN1, STNB1, stoned-b1

Location

Chromosome 2: 48,757,325-48,825,652 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 39662 variant alleles and maps to 419 oligo probes.

Gene

This transcript is a product of gene ENSG00000243244.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000309835.3	STON1-201	5802	735aa	ENSP00000310969.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1841	Q9Y6Q2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406226.1	STON1-001	5614	735aa	ENSP00000384615.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1841	Q9Y6Q2	NM_001198595.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404752.1	STON1-002	5511	735aa	ENSP00000385273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1841	Q9Y6Q2	NM_006873.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444932.1	STON1-003	1006	93aa	ENSP00000399868.1	Nonsense mediated decay		H7C1E2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000484110.1	STON1-004	2243	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 5,614 bps, Translation length: 735 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6Q2

CCDS

This transcript is a member of the Human CCDS set: CCDS1841

Version

ENST00000406226.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000323848 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000406226.1 STON1-001

Summary