Transcript: ENST00000348624.4 AP5Z1-001

Description

adaptor-related protein complex 5, zeta 1 subunit [Source:HGNC Symbol;Acc:22197]

Gene Synonyms

KIAA0415, SPG48, zeta

Location

Chromosome 7: 4,815,253-4,831,399 forward strand.

About this transcript

This transcript has 17 exons, is annotated with 7 domains and features, is associated with 13199 variant alleles and maps to 512 oligo probes.

Gene

This transcript is a product of gene ENSG00000242802.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000348624.4	AP5Z1-001	2901	807aa	ENSP00000297562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47528	A4D1Z4 O43299	NM_014855.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000401897.1	AP5Z1-201	1925	613aa	ENSP00000384980.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O43299	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490487.1	AP5Z1-008	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496303.1	AP5Z1-003	5660	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477680.1	AP5Z1-002	3081	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469614.1	AP5Z1-004	2337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491375.1	AP5Z1-005	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477454.1	AP5Z1-007	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,901 bps, Translation length: 807 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43299

CCDS

This transcript is a member of the Human CCDS set: CCDS47528

Version

ENST00000348624.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000323771 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000348624.4 AP5Z1-001

Summary