Transcript: ENST00000441989.2 ARPC1A-003

Description

actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703]

Gene Synonyms

Arc40, HEL-68, SOP2Hs, SOP2L

Location

Chromosome 7: 98,923,521-98,985,787 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 2 domains and features, is associated with 27983 variant alleles and maps to 495 oligo probes.

Gene

This transcript is a product of gene ENSG00000241685.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000262942.5	ARPC1A-001	1565	370aa	ENSP00000262942.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5660	Q75MY0 Q92747	NM_006409.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432884.2	ARPC1A-201	1702	345aa	ENSP00000408578.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLQ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000441989.2	ARPC1A-003	1702	53aa	ENSP00000412879.1	Nonsense mediated decay		F8WFD3	-	-
ENST00000432786.1	ARPC1A-009	1516	279aa	ENSP00000408711.1	Nonsense mediated decay		E9PF58 Q75MY0	-	-
ENST00000471960.1	ARPC1A-005	741	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463009.1	ARPC1A-004	719	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477240.1	ARPC1A-007	541	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 3, Transcript length: 1,702 bps, Translation length: 53 residues

Version

ENST00000441989.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335909 (version 2)

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Transcript: ENST00000441989.2 ARPC1A-003

Summary