Transcript: ENST00000420220.1 C1orf226-003

Description

chromosome 1 open reading frame 226 [Source:HGNC Symbol;Acc:34351]

Gene Synonyms

FLJ13137

Location

About this transcript

This transcript has 4 exons, is annotated with 5 domains and features, is associated with 7479 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000426197.2	C1orf226-002	1049	315aa	ENSP00000413150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44268	A1L170 F8W6W0	NM_001135240.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000458626.2	C1orf226-001	4118	272aa	ENSP00000437071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53422	A1L170 F8W6W0	NM_001085375.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000420220.1	C1orf226-003	702	171aa	ENSP00000398035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W6W0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 702 bps, Translation length: 171 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000420220.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000382766 (version 1)