Transcript: ENST00000457514.2 PATE4-001

Description

prostate and testis expressed 4 [Source:HGNC Symbol;Acc:35427]

Gene Synonyms

FLJ41047, PATE-B

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 2924 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000457514.2	PATE4-001	1983	98aa	ENSP00000411439.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44765	P0C8F1	NM_001144874.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534411.1	PATE4-003	897	59aa	ENSP00000435472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK74	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000525411.1	PATE4-002	1001	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,983 bps, Translation length: 98 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0C8F1

CCDS

This transcript is a member of the Human CCDS set: CCDS44765

Version

ENST00000457514.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000382865 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.