Transcript: ENST00000580650.1 C18orf42-002

Description

chromosome 18 open reading frame 42 [Source:HGNC Symbol;Acc:28285]

Location

About this transcript

This transcript has 2 exons, is annotated with 4 domains and features, is associated with 21669 variant alleles and maps to 42 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000434239.3	C18orf42-001	575	69aa	ENSP00000399075.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54179	P0CW23	NM_001145194.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580650.1	C18orf42-002	523	76aa	ENSP00000462259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS16	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 523 bps, Translation length: 76 residues

Version

ENST00000580650.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000442070 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.