Transcript: ENST00000590148.1 C17orf105-002

Description

chromosome 17 open reading frame 105 [Source:HGNC Symbol;Acc:37241]

Location

About this transcript

This transcript has 4 exons, is associated with 629 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000449302.3	C17orf105-001	3753	164aa	ENSP00000415662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45695	B2RV13	NM_001136483.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000590148.1	C17orf105-002	520	58aa	ENSP00000468141.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 520 bps, Translation length: 58 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000590148.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000453509 (version 1)