Transcript: ENST00000437810.2 IQCF3-001

Description

IQ motif containing F3 [Source:HGNC Symbol;Acc:31816]

Location

Chromosome 3: 51,860,899-51,864,843 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 1656 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSG00000229972.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000456080.1	IQCF3-004	1685	154aa	ENSP00000415609.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46837	B2RUV0 P0C7M6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437810.2	IQCF3-001	1270	154aa	ENSP00000409373.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46837	B2RUV0 P0C7M6	NM_001085479.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446775.1	IQCF3-002	1241	154aa	ENSP00000401767.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46837	B2RUV0 P0C7M6	NM_001207023.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440739.2	IQCF3-201	865	154aa	ENSP00000402012.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46837	B2RUV0 P0C7M6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444293.1	IQCF3-003	450	93aa	ENSP00000402530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F2Z334	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000462079.1	IQCF3-008	478	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472485.1	IQCF3-005	408	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474242.1	IQCF3-007	642	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465028.1	IQCF3-006	468	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,270 bps, Translation length: 154 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P0C7M6

CCDS

This transcript is a member of the Human CCDS set: CCDS46837

Version

ENST00000437810.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000346576 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000437810.2 IQCF3-001

Summary