Transcript: ENST00000599795.1 NTF4-001

Description

neurotrophin 4 [Source:HGNC Symbol;Acc:8024]

Gene Synonyms

CG-beta-a, CGB6, GLC10, GLC1O, NT-4, NT-4/5, NT-5, NT4, NT5, NTF5

Location

Chromosome 19: 49,559,050-49,568,333 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 4 domains and features, is associated with 5007 variant alleles and maps to 637 oligo probes.

Gene

This transcript is a product of gene ENSG00000225950.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301411.3	NTF4-201	999	210aa	ENSP00000301411.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12754	M0R0X2 P34130	NM_006179.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451356.2	NTF4-202	1748	260aa	ENSP00000391622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EP46	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593537.1	NTF4-002	932	210aa	ENSP00000469455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12754	M0R0X2 P34130	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595857.1	NTF4-004	813	143aa	ENSP00000471508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0X2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599795.1	NTF4-001	1748	153aa	ENSP00000470689.1	Nonsense mediated decay		M0QZQ0	-	-
ENST00000594938.1	NTF4-003	278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,748 bps, Translation length: 153 residues

Version

ENST00000599795.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466257 (version 1)

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Transcript: ENST00000599795.1 NTF4-001

Summary