Transcript: ENST00000593537.1 NTF4-002

Description

neurotrophin 4 [Source:HGNC Symbol;Acc:8024]

Gene Synonyms

CG-beta-a, CGB6, GLC10, GLC1O, NT-4, NT-4/5, NT-5, NT4, NT5, NTF5

Location

Chromosome 19: 49,564,323-49,565,254 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 19 domains and features, is associated with 615 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSG00000225950.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000301411.3	NTF4-201	999	210aa	ENSP00000301411.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12754	M0R0X2 P34130	NM_006179.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451356.2	NTF4-202	1748	260aa	ENSP00000391622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EP46	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000593537.1	NTF4-002	932	210aa	ENSP00000469455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12754	M0R0X2 P34130	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000595857.1	NTF4-004	813	143aa	ENSP00000471508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R0X2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000599795.1	NTF4-001	1748	153aa	ENSP00000470689.1	Nonsense mediated decay		M0QZQ0	-	-
ENST00000594938.1	NTF4-003	278	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 932 bps, Translation length: 210 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P34130

CCDS

This transcript is a member of the Human CCDS set: CCDS12754

Version

ENST00000593537.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000466258 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000593537.1 NTF4-002

Summary