Transcript: ENST00000517825.1 EBF2-003

Description

early B-cell factor 2 [Source:HGNC Symbol;Acc:19090]

Gene Synonyms

COE2, EBF-2, FLJ11500, O/E-3, OE-3

Location

About this transcript

This transcript has 6 exons, is associated with 7061 variant alleles and maps to 226 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000520164.1	EBF2-001	5145	575aa	ENSP00000430241.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43726	B2RNT0 B7Z934 Q9HAK2	NM_022659.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000408929.3	EBF2-002	1888	427aa	ENSP00000386178.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z934	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535548.1	EBF2-201	1017	264aa	ENSP00000437909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H645	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000517825.1	EBF2-003	2505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 2,505 bps,

Version

ENST00000517825.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000375888 (version 1)