Transcript: ENST00000507737.1 TENM3-006

Description

teneurin transmembrane protein 3 [Source:HGNC Symbol;Acc:29944]

Gene Synonyms

KIAA1455, MCOPCB9, ODZ3, TNM3, Ten-M3, Ten-m3

Location

Chromosome 4: 183,601,525-183,603,069 forward strand.

About this transcript

This transcript has 2 exons, is associated with 782 variant alleles and maps to 78 oligo probes.

Gene

This transcript is a product of gene ENSG00000218336.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000511685.1	TENM3-001	10896	2699aa	ENSP00000424226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47165	D6RGC5 G3CAS9 Q9P273	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406950.2	TENM3-201	8428	2699aa	ENSP00000385276.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47165	D6RGC5 G3CAS9 Q9P273	NM_001080477.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000512480.1	TENM3-004	651	170aa	ENSP00000421320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGC5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510504.1	TENM3-005	548	182aa	ENSP00000426914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YAF0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000502950.1	TENM3-003	3394	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513201.1	TENM3-002	1237	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507737.1	TENM3-006	469	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 469 bps,

Version

ENST00000507737.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361739 (version 1)

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Transcript: ENST00000507737.1 TENM3-006

Summary